Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889573.1_cds_XP_016444281.1_39361
CDS Infomation

[gene=LOC107769569] [db_xref=GeneID:107769569] [protein=protein NRT1/ PTR FAMILY 2.8-like] [protein_id=XP_016444281.1] [location=join(83312..83432,83544..83761,84188..85636)] [gbkey=CDS]
Sequence

ATGGCTGAAGAGATCATCAATGCAAGCCAATATTCTTCCCCTGAAGAATCAAATATTGCT
CCAACAATTCCTCGTCCCACAAGAAAAAAGGGAGGATGGACAGCCATAGCATTCATTCTT
GGGAATGAATCGTTTGAGAAATTGGCGTCGGTGAGTTTGATATCCAACATGACCACATAT
TTGCGGACCAAATACAATATGGGGGGAGTATTTTTGGTGAACGTGGTCAGTATATGGTCT
GGCTGCTCCAACATTACACCTTTAGCTGGTGCTTTCTTCGCTGATGCTCACCTTGGCAGA
TTCCTCACTCTCCTCTTTGGTTCCCTTGCTTCTTTCCTGGGGATGGGAATGGTGACTCTA
ACCGCTGGAGTAGATGAACTCAGGCCACCTAATTGTCAGGGCCTTGCAACTTGTTCCGAT
CCACACAAATGGCAGCTTGCATTCCTTTTTGCAGGTCTTGGATTTATGGCTATAGGTTCA
GGAGGTATCCGAGCTTGTAACATCGCCTTTGGGGCTGATCAATTTGACACTAATACAGAG
AAGGGAAGGTCTCAGCTCAAAAGTTTCTTCAATTGGTGGTACTTTTCATTCACCATTGCC
CTTATCATTGCTCTCACAGTTGTTATCTACATCCAGACAAATATCAGCTGGTTTATTGGC
TTCCTAATCCCAACTTGCTGTTTAGCTCTTTCCATTATGATTTTCTTGATTGGTCGCAAC
ACTTACATCCGTTTGAAGCCTCAAGGATGTGTTTTTATCGACATGGCAAAGGTTATAAAT
GCAGCTTGCAGAAAGAGACACGTTCGCGTTGTACCAACATCAAATTCCCTTTATGAACCT
GTCCCTAAGGAAACTGCAGAAAACCAGATATCAGTGCTTAGACACACAGATAGATTCAAG
TGCTTAGATAAGGCCGCTGTGATTGTGGATCCGAGCAGTGAATTGAATGGTGATGGAGTT
GCTAAAGATAGCTGGAGACTCTGCAATGTTGAACAGGTCGAAAGGCTGAAATGTGTAGTG
GGAATTTTACCTGTTTGGATAGCTGGAATCACTTGTTTCATCACTATGGAACAGATGAAC
ACATTCGGGGTTCTTCAAGTAATTCAATCCAACACAAGAGTTGGGAATTTTAATATTCCT
CCCGGGTGGATGGGACTAGCATCTATGATTGCCCTGGCTATATGGATCTTCATATACGAG
TGTGTATACGTTCCCAATGCATCGAAAATCTCTAAGAAGGAAGCCAGATTGTCACTCCAA
ATAAGAGTCAAAATAGGCATTTTCATGTCAATTCTTTGCTTAGCAGTAGCTGCATTTGTA
GAAACAAGGCGCCGAGACTTGGCCTTGAAAGAAGGCACATTCATCTCTCCACTAGGTGTT
GCATTCTTTTTGCCTCAATTCATACTATCAGGGTTGACAGAAGCATTTGCCGCGGTCTCA
GTCATGGAATTCTTGAATAACCAGGTACCAGAGACAATGAGAAGTGTAGCTGGAGCAATT
TTTTTCTTGAGTCTAAGCATTGCCAGCTACCTCAACACTCTCATTGTCAATATCGTTGAG
ATGTTAAGTGGACTACACGGCGGAAAGCCATGGTTGGGAGGTCATGACCTTAACCAAAAC
AAGCTAGAACGTTTTTACATTCTTATTGCTGGATTGGGAGTACTAAACTTCATATACTTC
CATTTTTACGCCAGCCGTTACATTCTAAGTTATGAAGAGTCAAAGAGGAGACAGACTGTG
TTGGAAACTCGCATTGATCATGTTGACCTGCCAGAGAAGAAACCATGA

Peptide Sequence

PEP ID

XP_016444281.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 2.8-like [Nicotiana tabacum]
Sequence

MAEEIINASQYSSPEESNIAPTIPRPTRKKGGWTAIAFILGNESFEKLASVSLISNMTTY
LRTKYNMGGVFLVNVVSIWSGCSNITPLAGAFFADAHLGRFLTLLFGSLASFLGMGMVTL
TAGVDELRPPNCQGLATCSDPHKWQLAFLFAGLGFMAIGSGGIRACNIAFGADQFDTNTE
KGRSQLKSFFNWWYFSFTIALIIALTVVIYIQTNISWFIGFLIPTCCLALSIMIFLIGRN
TYIRLKPQGCVFIDMAKVINAACRKRHVRVVPTSNSLYEPVPKETAENQISVLRHTDRFK
CLDKAAVIVDPSSELNGDGVAKDSWRLCNVEQVERLKCVVGILPVWIAGITCFITMEQMN
TFGVLQVIQSNTRVGNFNIPPGWMGLASMIALAIWIFIYECVYVPNASKISKKEARLSLQ
IRVKIGIFMSILCLAVAAFVETRRRDLALKEGTFISPLGVAFFLPQFILSGLTEAFAAVS
VMEFLNNQVPETMRSVAGAIFFLSLSIASYLNTLIVNIVEMLSGLHGGKPWLGGHDLNQN
KLERFYILIAGLGVLNFIYFHFYASRYILSYEESKRRQTVLETRIDHVDLPEKKP

Transcript Sequence

Gene sequence data has not been registered.